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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29541273_29551285_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29541273 - 29551285

Intron Length:

10013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTGTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTCTTATAAAT

Flanking Amino Acid:

EICTVACKACGIMPVYHNMF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

88.9

24.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

70.3

0.46

65.4

Minor 5ss

39.5

-1.2

2.8

48.3

41.8

Minor BPS

57.2

0.3

1.7

79.39

36.1

Associated Gene:

Gene:

JAK2

Ensembl Gene ID:

ENSAPLG00000004748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030622

29531637 - 29584663

53027

ENSAPLT00000005025

29537868 - 29584663

46796