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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29551410_29552191_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29551410 - 29552191

Intron Length:

782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTTCTTAACA

Flanking Amino Acid:

ATRLILLYRIRFYFPHWYCN

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

82.1

25.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.4

0.71

0.9

77.5

35.6

Minor 5ss

39.6

-1.2

2.8

49.5

46.6

Minor BPS

85.7

1.12

0.9

87.92

29.1

Associated Gene:

Gene:

JAK2

Ensembl Gene ID:

ENSAPLG00000004748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030622

29531637 - 29584663

53027

ENSAPLT00000005025

29537868 - 29584663

46796