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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29556745_29559433_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29556745 - 29559433

Intron Length:

2689

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATATACA

5'SS Class:

major

3'SS Sequence:

GGCAATTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGGCAA

U12 Branch Point Sequence:

GGCAATTTAACA

Flanking Amino Acid:

TIHKQDSKNLEAEFQSLKEA

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

68.4

35.9

Major BPS

50.7

0.02

1.5

63.4

44.3

Major PPT

0.25

1.1

53.9

44.5

Minor 5ss

41.6

-0.9

2.6

48.9

42.2

Minor BPS

52.8

0.08

1.6

58.73

40.5

Associated Gene:

Gene:

JAK2

Ensembl Gene ID:

ENSAPLG00000004748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030622

29531637 - 29584663

53027

ENSAPLT00000005025

29537868 - 29584663

46796