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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29561144_29562730_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29561144 - 29562730

Intron Length:

1587

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGTATT

5'SS Class:

major

3'SS Sequence:

AAAATCTCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTCTTTTAATG

Flanking Amino Acid:

KKYFLTFAIERENATDYKHC

Intron Amino Acid Position:

441

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

1.1

84.7

32.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

67.5

0.39

59.5

41.6

Minor 5ss

44.1

-0.6

2.5

60.5

43.9

Minor BPS

70.4

0.5

1.2

71.97

35.2

Associated Gene:

Gene:

JAK2

Ensembl Gene ID:

ENSAPLG00000004748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030622

29531637 - 29584663

53027

ENSAPLT00000005025

29537868 - 29584663

46796