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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29563762_29564243_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29563762 - 29564243

Intron Length:

482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTCCG

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTTCCCTGTCT

Flanking Amino Acid:

HKIRNEDLIFEESLGQGTFT

Intron Amino Acid Position:

546

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

43.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

97.3

1.06

0.5

96.6

11.5

Minor 5ss

37.1

-1.5

2.9

48.8

Minor BPS

47.4

-0.1

3.6

88.28

36.8

Associated Gene:

Gene:

JAK2

Ensembl Gene ID:

ENSAPLG00000004748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030622

29531637 - 29584663

53027

ENSAPLT00000005025

29537868 - 29584663

46796