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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29568135_29568965_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29568135 - 29568965

Intron Length:

831

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGGGTAGT

5'SS Class:

major

3'SS Sequence:

TTCTGTTCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

CTATATATAAAA

Flanking Amino Acid:

KQLALAMHFLEDKGLVHGNV

Intron Amino Acid Position:

663

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

70.5

41.3

Major BPS

69.8

0.49

70.3

31.8

Major PPT

78.4

0.64

0.9

35.1

Minor 5ss

30.8

-2.2

38.8

41.6

Minor BPS

47.2

-0.2

1.8

59.53

39.7

Associated Gene:

Gene:

JAK2

Ensembl Gene ID:

ENSAPLG00000004748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030622

29531637 - 29584663

53027

ENSAPLT00000005025

29537868 - 29584663

46796