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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29569105_29570287_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29569105 - 29570287

Intron Length:

1183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTCTT

5'SS Class:

major

3'SS Sequence:

TGCAACTGCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TTGATCTTAACA

Flanking Amino Acid:

GISITVLPRDILLERIPWVP

Intron Amino Acid Position:

709

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

75.9

39.9

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

60.2

0.23

52.9

41.2

Minor 5ss

42.4

-0.8

3.1

39.9

Minor BPS

76.1

0.81

1.2

79.69

36.4

Associated Gene:

Gene:

JAK2

Ensembl Gene ID:

ENSAPLG00000004748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030622

29531637 - 29584663

53027

ENSAPLT00000005025

29537868 - 29584663

46796