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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29571202_29571873_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29571202 - 29571873

Intron Length:

672

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCCCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TCTCCCTTTATT

Flanking Amino Acid:

IRDLNSLFTPDYELLTENDM

Intron Amino Acid Position:

810

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

76.7

33.9

Major BPS

88.7

0.96

0.8

36.5

Major PPT

79.2

0.66

0.7

Minor 5ss

29.1

-2.4

2.7

33.3

41.7

Minor BPS

67.7

0.64

1.6

81.55

40.1

Associated Gene:

Gene:

JAK2

Ensembl Gene ID:

ENSAPLG00000004748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030622

29531637 - 29584663

53027

ENSAPLT00000005025

29537868 - 29584663

46796