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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29572011_29573795_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29572011 - 29573795

Intron Length:

1785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTGT

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTGATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TCATTTGTAATT

Flanking Amino Acid:

HLKFLQQLGKGNFGSVEMCR

Intron Amino Acid Position:

856

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.8

38.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

66.9

0.38

58.9

41.6

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

0.17

71.31

40.8

Associated Gene:

Gene:

JAK2

Ensembl Gene ID:

ENSAPLG00000004748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030622

29531637 - 29584663

53027

ENSAPLT00000005025

29537868 - 29584663

46796