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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29573986_29574744_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29573986 - 29574744

Intron Length:

759

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTGTCATCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTGTCATCAAAG

Flanking Amino Acid:

VKYKGVCYSAGRRNLRLIME

Intron Amino Acid Position:

919

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

80.6

31.9

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

61.4

0.26

1.1

60.4

39.5

Minor 5ss

41.4

-1

3.1

45.7

Minor BPS

50.2

-0.1

62.59

44.6

Associated Gene:

Gene:

JAK2

Ensembl Gene ID:

ENSAPLG00000004748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030622

29531637 - 29584663

53027

ENSAPLT00000005025

29537868 - 29584663

46796