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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29574870_29579548_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29574870 - 29579548

Intron Length:

4679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAGGG

5'SS Class:

major

3'SS Sequence:

ATTTTATGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TGTCTGTGAATT

Flanking Amino Acid:

LLLYASQICKGMEYLGTKRY

Intron Amino Acid Position:

961

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

63.6

41.3

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

71.6

0.49

0.9

70.8

39.5

Minor 5ss

31.5

-2.1

3.4

38.7

40.8

Minor BPS

48.2

-0

2.1

70.72

40.3

Associated Gene:

Gene:

JAK2

Ensembl Gene ID:

ENSAPLG00000004748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030622

29531637 - 29584663

53027

ENSAPLT00000005025

29537868 - 29584663

46796