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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29579722_29580693_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29579722 - 29580693

Intron Length:

972

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

CTATGTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTTTTTTTGACT

Flanking Amino Acid:

VKEPGESPIFWYAPESLTES

Intron Amino Acid Position:

1018

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

77.9

36.8

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

79.4

0.66

0.9

73.1

Minor 5ss

38.9

-1.2

50.6

40.1

Minor BPS

1.09

0.9

94.3

25.7

Associated Gene:

Gene:

JAK2

Ensembl Gene ID:

ENSAPLG00000004748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030622

29531637 - 29584663

53027

ENSAPLT00000005025

29537868 - 29584663

46796