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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29580812_29582593_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29580812 - 29582593

Intron Length:

1782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

CCTTCTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

TATTATTTACAA

Flanking Amino Acid:

YIEKSKSPPAEFMRMIGNDK

Intron Amino Acid Position:

1058

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

36.3

Major BPS

75.9

0.64

66.1

40.5

Major PPT

82.4

0.73

0.8

79.8

32.2

Minor 5ss

38.9

-1.2

2.7

53.8

42.8

Minor BPS

0.03

1.9

66.79

39.3

Associated Gene:

Gene:

JAK2

Ensembl Gene ID:

ENSAPLG00000004748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030622

29531637 - 29584663

53027

ENSAPLT00000005025

29537868 - 29584663

46796