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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_2959132_2961644_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2959132 - 2961644

Intron Length:

2513

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTCACTGG

5'SS Class:

weak_major

3'SS Sequence:

AAAATTATCTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TTTGCAAAAATT

Flanking Amino Acid:

KIYELTVLKDRFPQNKNNDS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.8

0.14

1.3

46.2

44.5

Major BPS

68.1

0.45

58.1

38.5

Major PPT

52.6

0.06

1.1

54.3

43.8

Minor 5ss

37.9

-1.4

3.1

48.2

47.4

Minor BPS

46.7

-0.1

2.2

73.84

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001106

2959053 - 2961814

2762