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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29613207_29617487_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29613207 - 29617487

Intron Length:

4281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGTG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATGTATTTAATT

Flanking Amino Acid:

GYGTLLQRIKGEAENILDTQ

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

77.9

36.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.5

0.89

0.7

88.7

27.5

Minor 5ss

42.4

-0.8

3.1

57.3

47.4

Minor BPS

67.5

0.63

1.4

79.03

37.5

Associated Gene:

Gene:

PLGRKT

Ensembl Gene ID:

ENSAPLG00000018947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035153

29612568 - 29638923

26356

ENSAPLT00000022384

29612568 - 29637400

24833