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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29619946_29637313_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29619946 - 29637313

Intron Length:

17368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGCAC

5'SS Class:

major

3'SS Sequence:

CTTTCTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

ACTTTCTGAATT

Flanking Amino Acid:

GVHAHELAAAEYISLSIWYS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.2

63.9

42.4

Major BPS

82.1

0.8

71.6

36.4

Major PPT

87.1

0.84

0.6

80.8

31.3

Minor 5ss

36.6

-1.5

3.3

50.1

46.5

Minor BPS

67.6

0.63

1.4

78.66

37.9

Associated Gene:

Gene:

PLGRKT

Ensembl Gene ID:

ENSAPLG00000018947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035153

29612568 - 29638923

26356