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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29649650_29650899_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29649650 - 29650899

Intron Length:

1250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTCCTGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TTTCCCCTACTT

Flanking Amino Acid:

KNTSAILYIADSADDVLRPE

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

1.1

87.9

29.3

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

75.4

0.57

76.3

32.7

Minor 5ss

55.9

0.2

2.5

39.7

Minor BPS

0.33

82.26

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004669

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045347

29644660 - 29655462

10803

ENSAPLT00000004801

29644660 - 29655487

10828