Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29707346_29712630_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29707346 - 29712630

Intron Length:

5285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTAGG

5'SS Class:

major

3'SS Sequence:

ATTTCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTATCAGTATTT

Flanking Amino Acid:

RPDSTMIAVSTAKGYILFFE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

66.8

44.5

Major BPS

88.7

0.96

0.8

36.5

Major PPT

88.1

0.86

0.7

85.6

28.2

Minor 5ss

37.3

-1.4

2.7

48.1

41.6

Minor BPS

46.9

-0.1

2.4

73.9

43.1

Associated Gene:

Gene:

RIC1

Ensembl Gene ID:

ENSAPLG00000004154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004288

29696567 - 29743156

46590

ENSAPLT00000004287

29696567 - 29743156

46590