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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29742525_29742870_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29742525 - 29742870

Intron Length:

346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTCCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TATACCTTTATT

Flanking Amino Acid:

NAVDKWASTDCPGYKPFLNI

Intron Amino Acid Position:

1325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

27.7

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

83.1

0.74

0.8

77.2

36.9

Minor 5ss

38.8

-1.3

3.4

43.6

Minor BPS

67.2

0.62

1.6

39.5

Associated Gene:

Gene:

RIC1

Ensembl Gene ID:

ENSAPLG00000004154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004287

29696567 - 29743156

46590

ENSAPLT00000004288

29696567 - 29743156

46590