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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29756453_29759040_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29756453 - 29759040

Intron Length:

2588

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCCTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

TTGGCAATAACT

Flanking Amino Acid:

HTLAKKFYYKSMNDLNLGDV

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

38.6

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

0.94

0.7

87.5

Minor 5ss

41.4

-1

3.1

56.1

Minor BPS

54.6

0.22

78.21

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028878

29756258 - 29761147

4890