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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29793238_29793282_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

29793238 - 29793282

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTTCTTC

5'SS Class:

weak_major

3'SS Sequence:

TGCTTGTGAGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTTCAA

U12 Branch Point Sequence:

AAACCTTCAACT

Flanking Amino Acid:

LTSNCCLEAKRPEFVLYAMF

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.6

0.18

1.3

58.6

41.4

Major BPS

65.8

0.39

1.1

69.2

36.3

Major PPT

47.5

-0.1

1.8

54.3

44.7

Minor 5ss

50.1

2.5

68.4

42.5

Minor BPS

58.3

0.34

1.5

70.85

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003923

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004024

29787538 - 29795746

8209