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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29793726_29795519_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29793726 - 29795519

Intron Length:

1794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TTTCTATCAGTC

Flanking Amino Acid:

TGGFLGPPLAGLIVDMAGDY

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.8

34.8

Major BPS

73.8

0.59

1.3

72.8

Major PPT

95.4

1.02

0.6

88.7

28.3

Minor 5ss

39.7

-1.2

2.8

46.7

43.9

Minor BPS

45.3

-0.3

1.9

61.17

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003923

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045457

29790966 - 29795746

4781

ENSAPLT00000004024

29787538 - 29795746

8209