Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29802626_29803810_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29802626 - 29803810

Intron Length:

1185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGCACG

5'SS Class:

major

3'SS Sequence:

TGATCTGTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TTCTTCTTGATC

Flanking Amino Acid:

KRCSGYKSLRSKSTSMGTIR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

1.1

66.3

45.2

Major BPS

83.8

0.84

73.6

41.8

Major PPT

70.9

0.47

64.5

41.2

Minor 5ss

39.3

-1.2

2.8

44.3

Minor BPS

73.1

0.71

1.1

76.64

Associated Gene:

Gene:

MLANA

Ensembl Gene ID:

ENSAPLG00000003877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003969

29800872 - 29805024

4153