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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29895184_29897888_F

Intron Information:

Intron Rank:

128212

Intron Class:

major

Intron Phase:

Intron Coordinates:

29895184 - 29897888

Intron Length:

2705

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

TTTTCTGCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAA

U12 Branch Point Sequence:

TTGTGACTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

72.6

33.5

Major BPS

75.5

0.63

40.9

Major PPT

82.8

0.74

0.8

81.8

30.3

Minor 5ss

32.5

-2

2.8

43.1

43.9

Minor BPS

47.7

-0.1

2.3

73.71

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026438

29893935 - 29909229

15295