Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29904690_29906017_F

Intron Information:

Intron Rank:

128216

Intron Class:

major

Intron Phase:

Intron Coordinates:

29904690 - 29906017

Intron Length:

1328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATC

5'SS Class:

strong_major

3'SS Sequence:

GTTGTAAATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TGGTTGTAAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

25.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

67.3

0.39

1.1

59.6

44.4

Minor 5ss

-1.3

3.1

51.9

44.9

Minor BPS

-0.3

2.3

58.78

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044250

29893935 - 29909229

15295

ENSAPLT00000026438

29893935 - 29909229

15295