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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29970725_29989988_F

Intron Information:

Intron Rank:
5
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
29970725 - 29989988
Intron Length:
19264

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GGG|GTAAGAATT
5'SS Class:
strong_major
3'SS Sequence:
TTTTATTTTTCAG|A
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTTTTAT
U12 Branch Point Sequence:
TTATTTTTATTT
Flanking Amino Acid:
NKEVHAKILLGGPEDTINDC
Intron Amino Acid Position:
326

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
85.4
0.83
0.9
84.6
33.3
Major BPS
96.5
1.15
0.6
86
34.2
Major PPT
93.8
0.99
0.6
92.5
25.7
Minor 5ss
39
-1.2
3.1
50.4
45.6
Minor BPS
64.7
0.54
1.5
79.8
36.8

Associated Gene:

Gene:
UHRF2
Ensembl Gene ID:
ENSAPLG00000013042
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000041509
29935911 - 30020387
84477
ENSAPLT00000013585
29935911 - 30020387
84477
ENSAPLT00000003674
29935911 - 30020387
84477