Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_30019346_30020240_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30019346 - 30020240

Intron Length:

895

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTATGTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTATGT

Flanking Amino Acid:

TTECLHNVCKSCLQRSFRAE

Intron Amino Acid Position:

802

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

83.6

27.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.6

0.6

0.9

69.7

41.2

Minor 5ss

38.8

-1.3

3.1

49.9

40.5

Minor BPS

54.9

0.23

1.9

74.38

43.4

Associated Gene:

Gene:

UHRF2

Ensembl Gene ID:

ENSAPLG00000013042

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041509

29935911 - 30020387

84477

ENSAPLT00000013585

29935911 - 30020387

84477

ENSAPLT00000003674

29935911 - 30020387

84477