Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_30040031_30040557_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30040031 - 30040557

Intron Length:

527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTGAA

5'SS Class:

major

3'SS Sequence:

TTGTGTCCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAC

U12 Branch Point Sequence:

CTTGCCTTAACA

Flanking Amino Acid:

SKFLTHQVFNSYHSETNIVR

Intron Amino Acid Position:

623

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

71.4

33.7

Major BPS

61.1

0.28

1.1

69.4

35.9

Major PPT

79.2

0.66

0.9

70.3

41.3

Minor 5ss

34.4

-1.8

2.9

40.7

45.6

Minor BPS

79.8

0.93

1.3

83.03

38.2

Associated Gene:

Gene:

GLDC

Ensembl Gene ID:

ENSAPLG00000012359

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038095

30023988 - 30065520

41533

ENSAPLT00000018482

30024169 - 30065520

41352

ENSAPLT00000012975

30023988 - 30065520

41533