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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_30042994_30043981_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
30042994 - 30043981

Intron Length:
988

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACATCA

5'SS Class:
major

3'SS Sequence:
ATTTGTATTGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TATTTTTTAATA

Flanking Amino Acid:
KATSNICTAQALLANMAAMF

Intron Amino Acid Position:
482

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.8
0.66
1.1
71.4
35.1

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
76.8
0.6
0.9
71.2
39

Minor 5ss
43.8
-0.7
2.9
57.7
46.5

Minor BPS
77.2
0.85
1
79.7
29.8

Associated Gene:

Gene:
GLDC

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

30023988 - 30065520
41533

30023988 - 30065520
41533

30024169 - 30065520
41352