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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_30046150_30048513_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
30046150 - 30048513

Intron Length:
2364

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAATATGT

5'SS Class:
strong_major

3'SS Sequence:
TTCTTTGTAACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTAAT

U12 Branch Point Sequence:
TTCTTTGTAACA

Flanking Amino Acid:
AAAEAMQLCHRHNKRRKFYV

Intron Amino Acid Position:
308

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.3
0.74
1
74.4
36.8

Major BPS
87
0.92
0.9
86.2
29.1

Major PPT
79.8
0.67
0.9
76.6
36.3

Minor 5ss
39.7
-1.2
3.1
57.2
46.8

Minor BPS
59.6
0.3
2
73.92
38.7

Associated Gene:

Gene:
GLDC

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

30023988 - 30065520
41533

30024169 - 30065520
41352

30023988 - 30065520
41533