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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_30125545_30135533_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30125545 - 30135533

Intron Length:

9989

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

ATCTGAATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

ATGTCTTTAAAC

Flanking Amino Acid:

NYLHFGEPKSWYAIPPEHGK

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

1.1

72.4

38.4

Major BPS

80.4

0.76

80.3

31.8

Major PPT

0.41

41.2

Minor 5ss

30.3

-2.3

3.8

38.4

40.8

Minor BPS

70.9

0.64

1.3

73.94

36.7

Associated Gene:

Gene:

KDM4C

Ensembl Gene ID:

ENSAPLG00000012301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022013

30094461 - 30364621

270161

ENSAPLT00000020914

30098761 - 30364621

265861

ENSAPLT00000012812

30094461 - 30364621

270161