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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_30232888_30236494_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30232888 - 30236494

Intron Length:

3607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTATAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TCTCTTATAACA

Flanking Amino Acid:

QRRKKKKLPKSLQHNRSRSK

Intron Amino Acid Position:

384

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

79.8

33.2

Major BPS

79.1

0.72

69.3

38.4

Major PPT

77.6

0.62

0.9

73.8

34.2

Minor 5ss

44.8

-0.6

3.2

66.9

44.3

Minor BPS

57.7

0.24

1.6

69.02

37.4

Associated Gene:

Gene:

KDM4C

Ensembl Gene ID:

ENSAPLG00000012301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020914

30098761 - 30364621

265861

ENSAPLT00000012812

30094461 - 30364621

270161

ENSAPLT00000022013

30094461 - 30364621

270161