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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_30239266_30242452_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30239266 - 30242452

Intron Length:

3187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTATGTGAA

5'SS Class:

major

3'SS Sequence:

TTTTCCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

CCATGCTAAATT

Flanking Amino Acid:

DEEDGMETSSSAEAESKKIS

Intron Amino Acid Position:

585

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.6

0.39

1.1

63.2

36.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

0.99

0.5

92.6

17.2

Minor 5ss

40.1

-1.1

3.1

48.8

47.3

Minor BPS

48.2

-0

2.1

63.75

47.1

Associated Gene:

Gene:

KDM4C

Ensembl Gene ID:

ENSAPLG00000012301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022013

30094461 - 30364621

270161

ENSAPLT00000020914

30098761 - 30364621

265861

ENSAPLT00000012812

30094461 - 30364621

270161