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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_30242565_30268035_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30242565 - 30268035

Intron Length:

25471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTTAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTTCTTTAAG

Flanking Amino Acid:

LVKQQATSDEELPETTVMEE

Intron Amino Acid Position:

622

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.6

22.2

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

85.8

0.8

0.9

91.3

Minor 5ss

30.8

-2.2

3.2

39.9

46.1

Minor BPS

62.2

0.24

1.8

72.26

40.2

Associated Gene:

Gene:

KDM4C

Ensembl Gene ID:

ENSAPLG00000012301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012812

30094461 - 30364621

270161

ENSAPLT00000022013

30094461 - 30364621

270161

ENSAPLT00000020914

30098761 - 30364621

265861