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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_30270912_30290140_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30270912 - 30290140

Intron Length:

19229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTTTTATTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTTCTACACT

Flanking Amino Acid:

SRCRKEAWTAECCLCNLRGG

Intron Amino Acid Position:

781

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.3

79.1

37.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.2

0.9

0.6

89.7

25.5

Minor 5ss

-0.2

2.8

71.9

38.1

Minor BPS

56.3

0.28

2.1

79.89

42.3

Associated Gene:

Gene:

KDM4C

Ensembl Gene ID:

ENSAPLG00000012301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012812

30094461 - 30364621

270161

ENSAPLT00000022013

30094461 - 30364621

270161

ENSAPLT00000020914

30098761 - 30364621

265861