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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_30335615_30339268_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30335615 - 30339268

Intron Length:

3654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

CCATTTTTTCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TATTTTAAAATT

Flanking Amino Acid:

CCRHKINQNVRTKACEKSIT

Intron Amino Acid Position:

898

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

80.4

33.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

72.3

0.5

1.1

70.8

38.8

Minor 5ss

34.1

-1.8

3.3

45.4

43.9

Minor BPS

49.9

0.07

1.9

73.1

38.4

Associated Gene:

Gene:

KDM4C

Ensembl Gene ID:

ENSAPLG00000012301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020914

30098761 - 30364621

265861

ENSAPLT00000012812

30094461 - 30364621

270161