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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_30356120_30360035_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30356120 - 30360035

Intron Length:

3916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTAAATAAATTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAT

Flanking Amino Acid:

LGTNTAHMYQVEFEDGSQIV

Intron Amino Acid Position:

995

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.7

84.8

25.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

55.4

0.12

1.1

54.1

44.4

Minor 5ss

31.8

-2.1

3.3

42.9

44.7

Minor BPS

79.5

1.2

92.62

Associated Gene:

Gene:

KDM4C

Ensembl Gene ID:

ENSAPLG00000012301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020914

30098761 - 30364621

265861

ENSAPLT00000012812

30094461 - 30364621

270161

ENSAPLT00000022013

30094461 - 30364621

270161