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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_31790825_31792825_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

31790825 - 31792825

Intron Length:

2001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAGAAAAA

5'SS Class:

weak_major

3'SS Sequence:

GGGTCCTGCTTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CTTGGCATAACT

Flanking Amino Acid:

LIHVLMLLFVCVF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.05

1.2

54.1

38.8

Major BPS

100

1.24

0.5

100

Major PPT

57.2

0.16

54.4

41.4

Minor 5ss

32.7

-2

3.3

39.6

46.1

Minor BPS

51.8

0.14

2.2

76.44

Associated Gene:

Gene:

PTPRD

Ensembl Gene ID:

ENSAPLG00000012170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019782

31790814 - 32026461

235648

ENSAPLT00000012786

31790814 - 32026461

235648