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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_31877186_31880595_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31877186 - 31880595

Intron Length:

3410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAATG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ATGTTATTACCT

Flanking Amino Acid:

YSAPANLYVRVRRVPPRFSI

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

75.5

40.6

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

84.7

0.78

0.9

76.9

42.1

Minor 5ss

35.7

-1.6

3.3

47.7

Minor BPS

54.9

0.23

1.9

74.93

41.9

Associated Gene:

Gene:

PTPRD

Ensembl Gene ID:

ENSAPLG00000012170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046203

31789627 - 32026461

236835

ENSAPLT00000019782

31790814 - 32026461

235648

ENSAPLT00000012786

31790814 - 32026461

235648