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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_31904776_31910683_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31904776 - 31910683

Intron Length:

5908

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATACTC

5'SS Class:

strong_major

3'SS Sequence:

TATTGTGCTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TCATCTTTAAAT

Flanking Amino Acid:

KPKLVSTTGAVPGKPRLVIS

Intron Amino Acid Position:

804

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

71.8

38.2

Major BPS

88.7

0.96

0.8

36.5

Major PPT

76.3

0.59

69.1

41.6

Minor 5ss

36.6

-1.5

3.2

51.3

45.2

Minor BPS

73.2

0.81

1.3

81.97

39.4

Associated Gene:

Gene:

PTPRD

Ensembl Gene ID:

ENSAPLG00000012170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012786

31790814 - 32026461

235648