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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_31911272_31911692_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31911272 - 31911692

Intron Length:

421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCAGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

GTTTATATACAT

Flanking Amino Acid:

VQFRTLPVDQVFAKNFHVKA

Intron Amino Acid Position:

1000

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

81.6

33.2

Major BPS

79.2

0.73

75.3

39.4

Major PPT

85.2

0.79

0.8

82.8

27.4

Minor 5ss

42.5

-0.8

3.4

64.3

47.2

Minor BPS

-0.3

68.06

42.2

Associated Gene:

Gene:

PTPRD

Ensembl Gene ID:

ENSAPLG00000012170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012786

31790814 - 32026461

235648