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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_31912967_31918045_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31912967 - 31918045

Intron Length:

5079

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TCACCTTTAATT

Flanking Amino Acid:

LPEVPSNENIKGYYIVIVPL

Intron Amino Acid Position:

1119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

71.2

34.5

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

86.6

0.82

0.8

80.9

Minor 5ss

28.3

-2.5

3.1

31.3

36.6

Minor BPS

0.74

1.2

77.99

38.7

Associated Gene:

Gene:

PTPRD

Ensembl Gene ID:

ENSAPLG00000012170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046203

31789627 - 32026461

236835

ENSAPLT00000019782

31790814 - 32026461

235648

ENSAPLT00000012786

31790814 - 32026461

235648