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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_31928407_31929759_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31928407 - 31929759

Intron Length:

1353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTTAG

5'SS Class:

major

3'SS Sequence:

TTTATTTGTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTATTTTATTT

Flanking Amino Acid:

VLAVMEHSESTMYATSPYSD

Intron Amino Acid Position:

1220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

1.1

68.3

39.3

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

80.1

0.68

0.9

76.6

37.5

Minor 5ss

42.5

-0.8

2.9

59.1

45.3

Minor BPS

61.8

0.45

1.6

79.69

Associated Gene:

Gene:

PTPRD

Ensembl Gene ID:

ENSAPLG00000012170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046203

31789627 - 32026461

236835

ENSAPLT00000019782

31790814 - 32026461

235648

ENSAPLT00000012786

31790814 - 32026461

235648