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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_31940586_31950020_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31940586 - 31950020

Intron Length:

9435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTACAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTATTTTAAATT

Flanking Amino Acid:

ELRRLNFQTPGMASHPPIPI

Intron Amino Acid Position:

1311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

74.6

28.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

67.8

0.4

62.5

37.3

Minor 5ss

25.3

-2.8

3.2

31.7

42.9

Minor BPS

63.7

0.51

1.6

79.64

37.1

Associated Gene:

Gene:

PTPRD

Ensembl Gene ID:

ENSAPLG00000012170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046203

31789627 - 32026461

236835

ENSAPLT00000012786

31790814 - 32026461

235648