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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_31950119_31959903_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31950119 - 31959903

Intron Length:

9785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTGAAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

AAATTTTCAATC

Flanking Amino Acid:

DNLKFSQEYESIDPGQQFTW

Intron Amino Acid Position:

1344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

80.3

28.1

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

80.2

0.68

82.4

26.6

Minor 5ss

40.6

-1.1

2.8

52.6

44.6

Minor BPS

52.9

0.07

1.4

58.62

Associated Gene:

Gene:

PTPRD

Ensembl Gene ID:

ENSAPLG00000012170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046203

31789627 - 32026461

236835

ENSAPLT00000019782

31790814 - 32026461

235648

ENSAPLT00000012786

31790814 - 32026461

235648