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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_31969898_31990110_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31969898 - 31990110

Intron Length:

20213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCACTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATATTCTTCACT

Flanking Amino Acid:

MMTKLEERSRVKCDQYWPSR

Intron Amino Acid Position:

1444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

74.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.5

0.75

0.8

78.2

28.9

Minor 5ss

31.1

-2.2

3.1

31.2

42.7

Minor BPS

67.4

0.63

1.7

82.83

38.2

Associated Gene:

Gene:

PTPRD

Ensembl Gene ID:

ENSAPLG00000012170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046203

31789627 - 32026461

236835

ENSAPLT00000019782

31790814 - 32026461

235648

ENSAPLT00000012786

31790814 - 32026461

235648