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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_32012029_32017546_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32012029 - 32017546

Intron Length:

5518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTGTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATATAT

U12 Branch Point Sequence:

TCTTTGGGAATA

Flanking Amino Acid:

LREFKVTDARDGQSRTVRQF

Intron Amino Acid Position:

1775

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

73.2

39.3

Major BPS

62.6

0.31

59.1

37.6

Major PPT

77.8

0.62

82.6

32.9

Minor 5ss

40.1

-1.1

2.8

44.4

43.5

Minor BPS

41.9

-0.6

2.5

58.85

41.8

Associated Gene:

Gene:

PTPRD

Ensembl Gene ID:

ENSAPLG00000012170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046203

31789627 - 32026461

236835

ENSAPLT00000019782

31790814 - 32026461

235648

ENSAPLT00000012786

31790814 - 32026461

235648