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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_3225387_3237089_R

Intron Information:

Intron Rank:

151749

Intron Class:

major

Intron Phase:

Intron Coordinates:

3225387 - 3237089

Intron Length:

11703

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTTAT

5'SS Class:

major

3'SS Sequence:

TTTTCTGTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGAAA

U12 Branch Point Sequence:

AAAAGCTGACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

77.3

33.6

Major BPS

65.4

0.38

1.4

75.9

36.3

Major PPT

0.76

0.8

77.4

36.9

Minor 5ss

44.8

-0.6

2.9

68.1

42.7

Minor BPS

43.2

-0.4

2.1

58.52

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029216

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042586

3225227 - 3237489

12263