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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_3225387_3274415_R

Intron Information:

Intron Rank:

151750

Intron Class:

major

Intron Phase:

Intron Coordinates:

3225387 - 3274415

Intron Length:

49029

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGAAA

U12 Branch Point Sequence:

AAAAGCTGACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

30.2

Major BPS

65.4

0.38

1.4

75.9

36.3

Major PPT

0.76

0.8

77.4

36.9

Minor 5ss

45.5

-0.5

2.9

64.1

47.4

Minor BPS

43.2

-0.4

2.1

58.52

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029216

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045745

3225227 - 3300816

75590