Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_32258468_32259238_F

Intron Information:

Intron Rank:

141441

Intron Class:

major

Intron Phase:

Intron Coordinates:

32258468 - 32259238

Intron Length:

771

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTATCTCCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TATATTTTGACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.16

0.7

89.2

23.6

Major BPS

79.2

0.73

75.3

39.4

Major PPT

80.1

0.68

0.8

78.6

Minor 5ss

25.7

-2.8

3.6

34.4

41.2

Minor BPS

64.6

0.44

1.2

70.61

34.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047570

32258404 - 32260407

2004